STRINGSTRING
gpJ gpJ gpI gpI gpW gpW gpV gpV PSEEN4151 PSEEN4151 PSEEN4154 PSEEN4154 PSEEN4155 PSEEN4155 PSEEN4149 PSEEN4149 PSEEN4159 PSEEN4159 PSEEN4150 PSEEN4150 PSEEN4164 PSEEN4164
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpJPyocin R2_PP, baseplate/tail fiber protein; Function of homologous gene experimentally demonstrated in an other organism; extrachromosomal origin. (293 aa)    
Predicted Functional Partners:
gpI
Pyocin R2_PP, tail formation protein GpI; Function of homologous gene experimentally demonstrated in an other organism; extrachromosomal origin.
 
 
 0.994
gpW
Pyocin R2_PP, baseplate protein; Function of homologous gene experimentally demonstrated in an other organism; extrachromosomal origin.
 
 
 0.994
gpV
Pyocin R2_PP, tail spike protein; Function of homologous gene experimentally demonstrated in an other organism; extrachromosomal origin.
 
  
 0.982
PSEEN4151
Putative pyocin R2_PP, tail formation protein gpU; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
 
 
 0.980
PSEEN4154
Putative pyocin R2_PP, tail tube protein GpFII; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
 
 
 0.975
PSEEN4155
Putative pyocin R2_PP, tail sheath protein gpFI; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
 
   0.973
PSEEN4149
Putative pyocin R2_PP, tail formation GpD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
 
  
 0.961
PSEEN4159
Putative phage variable tail fibre protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
 
     0.946
PSEEN4150
Putative pyocin R2_PP, tail component protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
  
 
 0.914
PSEEN4164
Putative phage protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
  
  
 0.908
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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